Phylogroup stability contrasts with high within sequence type complex dynamics of Escherichia coli bloodstream infection isolates over a 12-year period

Phylogroup stability contrasts with high within sequence type complex dynamics of Escherichia coli bloodstream infection isolates over a 12-year period

Abstract Background Escherichia coli is the leading cause of bloodstream infections, associated with a significant mortality. Recent genomic analyses revealed that few clonal lineages are involved in bloodstream infections and captured the emergence of some of them. However, data on within sequence...

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Bibliographic Details
Main Authors: Guilhem Royer, Mélanie Mercier Darty, Olivier Clermont, Bénédicte Condamine, Cédric Laouenan, Jean-Winoc Decousser, David Vallenet, Agnès Lefort, Victoire de Lastours, Erick Denamur, COLIBAFI and SEPTICOLI groups
Format: Article
Language:English
Published: BMC 2021-05-01
Series:Genome Medicine
Subjects:
Escherichia coli
Bloodstream infection
Antibiotic resistance
Extra-intestinal infection
Pandemic clones
Clonal replacement
Online Access:https://doi.org/10.1186/s13073-021-00892-0

Internet

https://doi.org/10.1186/s13073-021-00892-0

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