Hierarchical Modelling of Haplotype Effects on a Phylogeny

We introduce a hierarchical model to estimate haplotype effects based on phylogenetic relationships between haplotypes and their association with observed phenotypes. In a population there are many, but not all possible, distinct haplotypes and few observations per haplotype. Further, haplotype freq...

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Bibliographic Details
Main Authors: Maria Lie Selle, Ingelin Steinsland, Finn Lindgren, Vladimir Brajkovic, Vlatka Cubric-Curik, Gregor Gorjanc
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-01-01
Series:Frontiers in Genetics
Subjects:
DAG
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2020.531218/full