Occupancy classification of position weight matrix-inferred transcription factor binding sites.

Computational prediction of Transcription Factor Binding Sites (TFBS) from sequence data alone is difficult and error-prone. Machine learning techniques utilizing additional environmental information about a predicted binding site (such as distances from the site to particular chromatin features) to...

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Bibliographic Details
Main Authors: Hollis Wright, Aaron Cohen, Kemal Sönmez, Gregory Yochum, Shannon McWeeney
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2011-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3208542?pdf=render