Global improvements of a protein alignment algorithm and comparison with a global optimization solver

Global improvements of a protein alignment algorithm and comparison with a global optimization solver

The LovoAlign method for Protein Alignment, based on the Low-Order Value Optimization theory, is recalled. The method is modified in order to improve global convergence properties and compared against other global minimization procedures.

Bibliographic Details
Main Authors: Paulo Gouveia, Roberto Andreani, Ana Friedlander, Jose Mario Martínez, Leandro Martínez
Format: Article
Language:English
Published: Universidad Simón Bolívar 2013-01-01
Series:Bulletin of Computational Applied Mathematics
Subjects:
Protein alignment
global optimization
structal score
Online Access:http://www.compama.co.usb.ve/sites/default/files/fORTHCOMING/CompAMa%20Vol1-N1-(2012-002-PauloGouveia-Aceptado20121109).pdf

Internet

http://www.compama.co.usb.ve/sites/default/files/fORTHCOMING/CompAMa%20Vol1-N1-(2012-002-PauloGouveia-Aceptado20121109).pdf

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