HMM Logos for visualization of protein families

HMM Logos for visualization of protein families

<p>Abstract</p> <p>Background</p> <p>Profile Hidden Markov Models (pHMMs) are a widely used tool for protein family research. Up to now, however, there exists no method to visualize all of their central aspects graphically in an intuitively understandable way.</p>...

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Bibliographic Details
Main Authors: Schultz Jörg, Schuster-Böckler Benjamin, Rahmann Sven
Format: Article
Language:English
Published: BMC 2004-01-01
Series:BMC Bioinformatics
Subjects:
Hidden Markov Model
Sequence Logo
HMM Logo
profile
information content
hitting probability
dynamic programming
small GTPases
Online Access:http://www.biomedcentral.com/1471-2105/5/7

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http://www.biomedcentral.com/1471-2105/5/7

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