Juxtapose: a gene-embedding approach for comparing co-expression networks

Abstract Background Gene co-expression networks (GCNs) are not easily comparable due to their complex structure. In this paper, we propose a tool, Juxtapose, together with similarity measures that can be utilized for comparative transcriptomics between a set of organisms. While we focus on its appli...

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Bibliographic Details
Main Authors: Katie Ovens, Farhad Maleki, B. Frank Eames, Ian McQuillan
Format: Article
Language:English
Published: BMC 2021-03-01
Series:BMC Bioinformatics
Subjects:
Online Access:https://doi.org/10.1186/s12859-021-04055-1