riboFrame: an improved method for microbial taxonomy profiling from non-targeted metagenomics

riboFrame: an improved method for microbial taxonomy profiling from non-targeted metagenomics

Non-targeted metagenomics offers the unprecedented possibility of simultaneously investigate the microbial profile and the genetic capabilities of a sample by a direct analysis of its entire DNA content. The assessment of the microbial taxonomic composition is frequently obtained by mapping reads to...

Full description

Bibliographic Details
Main Authors: Matteo eRamazzotti, Luisa eBerná, Claudio eDonati, Duccio eCavalieri
Format: Article
Language:English
Published: Frontiers Media S.A. 2015-11-01
Series:Frontiers in Genetics
Subjects:
Metagenomics
16S rRNA gene
Variable region (VR)
Community profiling
Short reads
non-targeted approach
Online Access:http://journal.frontiersin.org/Journal/10.3389/fgene.2015.00329/full

Internet

http://journal.frontiersin.org/Journal/10.3389/fgene.2015.00329/full

Similar Items