Transcriptional Repressor HIC1 Contributes to Suppressive Function of Human Induced Regulatory T Cells

Summary: Regulatory T (Treg) cells are critical in regulating the immune response. In vitro induced Treg (iTreg) cells have significant potential in clinical medicine. However, applying iTreg cells as therapeutics is complicated by the poor stability of human iTreg cells and their variable suppressi...

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Main Authors: Ubaid Ullah, Syed Bilal Ahmad Andrabi, Subhash Kumar Tripathi, Obaiah Dirasantha, Kartiek Kanduri, Sini Rautio, Catharina C. Gross, Sari Lehtimäki, Kanchan Bala, Johanna Tuomisto, Urvashi Bhatia, Deepankar Chakroborty, Laura L. Elo, Harri Lähdesmäki, Heinz Wiendl, Omid Rasool, Riitta Lahesmaa
Format: Article
Language:English
Published: Elsevier 2018-02-01
Series:Cell Reports
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2211124718301190
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spelling doaj-743de4152c564e59b634c5b49edf2b2c2020-11-25T03:40:01ZengElsevierCell Reports2211-12472018-02-012282094210610.1016/j.celrep.2018.01.070Transcriptional Repressor HIC1 Contributes to Suppressive Function of Human Induced Regulatory T Cells Ubaid Ullah0Syed Bilal Ahmad Andrabi1Subhash Kumar Tripathi2Obaiah Dirasantha3Kartiek Kanduri4Sini Rautio5Catharina C. Gross6Sari Lehtimäki7Kanchan Bala8Johanna Tuomisto9Urvashi Bhatia10Deepankar Chakroborty11Laura L. Elo12Harri Lähdesmäki13Heinz Wiendl14Omid Rasool15Riitta Lahesmaa16Turku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, FinlandTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, FinlandTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, FinlandTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, FinlandTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland; Department of Computer Science, Aalto University School of Science, Aalto, FinlandDepartment of Computer Science, Aalto University School of Science, Aalto, FinlandDepartment of Neurology, University of Muenster, Albert-Schweitzer-Campus 1, Building A1, 48149 Muenster, GermanyTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, FinlandTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, FinlandTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, FinlandDepartment of Neurology, University of Muenster, Albert-Schweitzer-Campus 1, Building A1, 48149 Muenster, GermanyTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, FinlandTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, FinlandTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland; Department of Computer Science, Aalto University School of Science, Aalto, FinlandDepartment of Neurology, University of Muenster, Albert-Schweitzer-Campus 1, Building A1, 48149 Muenster, GermanyTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, FinlandTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland; Corresponding authorSummary: Regulatory T (Treg) cells are critical in regulating the immune response. In vitro induced Treg (iTreg) cells have significant potential in clinical medicine. However, applying iTreg cells as therapeutics is complicated by the poor stability of human iTreg cells and their variable suppressive activity. Therefore, it is important to understand the molecular mechanisms of human iTreg cell specification. We identified hypermethylated in cancer 1 (HIC1) as a transcription factor upregulated early during the differentiation of human iTreg cells. Although FOXP3 expression was unaffected, HIC1 deficiency led to a considerable loss of suppression by iTreg cells with a concomitant increase in the expression of effector T cell associated genes. SNPs linked to several immune-mediated disorders were enriched around HIC1 binding sites, and in vitro binding assays indicated that these SNPs may alter the binding of HIC1. Our results suggest that HIC1 is an important contributor to iTreg cell development and function.http://www.sciencedirect.com/science/article/pii/S2211124718301190iTregsuppressionHIC1FOXP3regulatory SNPRNA-seq
collection DOAJ
language English
format Article
sources DOAJ
author Ubaid Ullah
Syed Bilal Ahmad Andrabi
Subhash Kumar Tripathi
Obaiah Dirasantha
Kartiek Kanduri
Sini Rautio
Catharina C. Gross
Sari Lehtimäki
Kanchan Bala
Johanna Tuomisto
Urvashi Bhatia
Deepankar Chakroborty
Laura L. Elo
Harri Lähdesmäki
Heinz Wiendl
Omid Rasool
Riitta Lahesmaa
spellingShingle Ubaid Ullah
Syed Bilal Ahmad Andrabi
Subhash Kumar Tripathi
Obaiah Dirasantha
Kartiek Kanduri
Sini Rautio
Catharina C. Gross
Sari Lehtimäki
Kanchan Bala
Johanna Tuomisto
Urvashi Bhatia
Deepankar Chakroborty
Laura L. Elo
Harri Lähdesmäki
Heinz Wiendl
Omid Rasool
Riitta Lahesmaa
Transcriptional Repressor HIC1 Contributes to Suppressive Function of Human Induced Regulatory T Cells
Cell Reports
iTreg
suppression
HIC1
FOXP3
regulatory SNP
RNA-seq
author_facet Ubaid Ullah
Syed Bilal Ahmad Andrabi
Subhash Kumar Tripathi
Obaiah Dirasantha
Kartiek Kanduri
Sini Rautio
Catharina C. Gross
Sari Lehtimäki
Kanchan Bala
Johanna Tuomisto
Urvashi Bhatia
Deepankar Chakroborty
Laura L. Elo
Harri Lähdesmäki
Heinz Wiendl
Omid Rasool
Riitta Lahesmaa
author_sort Ubaid Ullah
title Transcriptional Repressor HIC1 Contributes to Suppressive Function of Human Induced Regulatory T Cells
title_short Transcriptional Repressor HIC1 Contributes to Suppressive Function of Human Induced Regulatory T Cells
title_full Transcriptional Repressor HIC1 Contributes to Suppressive Function of Human Induced Regulatory T Cells
title_fullStr Transcriptional Repressor HIC1 Contributes to Suppressive Function of Human Induced Regulatory T Cells
title_full_unstemmed Transcriptional Repressor HIC1 Contributes to Suppressive Function of Human Induced Regulatory T Cells
title_sort transcriptional repressor hic1 contributes to suppressive function of human induced regulatory t cells
publisher Elsevier
series Cell Reports
issn 2211-1247
publishDate 2018-02-01
description Summary: Regulatory T (Treg) cells are critical in regulating the immune response. In vitro induced Treg (iTreg) cells have significant potential in clinical medicine. However, applying iTreg cells as therapeutics is complicated by the poor stability of human iTreg cells and their variable suppressive activity. Therefore, it is important to understand the molecular mechanisms of human iTreg cell specification. We identified hypermethylated in cancer 1 (HIC1) as a transcription factor upregulated early during the differentiation of human iTreg cells. Although FOXP3 expression was unaffected, HIC1 deficiency led to a considerable loss of suppression by iTreg cells with a concomitant increase in the expression of effector T cell associated genes. SNPs linked to several immune-mediated disorders were enriched around HIC1 binding sites, and in vitro binding assays indicated that these SNPs may alter the binding of HIC1. Our results suggest that HIC1 is an important contributor to iTreg cell development and function.
topic iTreg
suppression
HIC1
FOXP3
regulatory SNP
RNA-seq
url http://www.sciencedirect.com/science/article/pii/S2211124718301190
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