Quantifying pluripotency landscape of cell differentiation from scRNA-seq data by continuous birth-death process.

Modeling cell differentiation from omics data is an essential problem in systems biology research. Although many algorithms have been established to analyze scRNA-seq data, approaches to infer the pseudo-time of cells or quantify their potency have not yet been satisfactorily solved. Here, we propos...

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Bibliographic Details
Main Authors: Jifan Shi, Tiejun Li, Luonan Chen, Kazuyuki Aihara
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-11-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1007488