CandiSSR: an efficient pipeline used for identifying candidate polymorphic SSRs based on multiple assembled sequences

CandiSSR: an efficient pipeline used for identifying candidate polymorphic SSRs based on multiple assembled sequences

Simple Sequence Repeats (SSRs), also known as microsatellites, are ubiquitous short tandem duplications commonly found in genomes and/or transcriptomes of diverse organisms. They represent one of the most powerful molecular markers for genetic analysis and breeding programs because of their high mut...

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Bibliographic Details
Main Authors: En-Hua eXia, Qiu-Yang eYao, Hai-Bin eZhang, Jian-Jun eJiang, Li-Ping eZhang, Li-Zhi eGao
Format: Article
Language:English
Published: Frontiers Media S.A. 2016-01-01
Series:Frontiers in Plant Science
Subjects:
microsatellites
transferability
Polymorphic SSR
CandiSSR
multiple assembled genomes
multiple assembled transcriptomes
Online Access:http://journal.frontiersin.org/Journal/10.3389/fpls.2015.01171/full

Internet

http://journal.frontiersin.org/Journal/10.3389/fpls.2015.01171/full

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