Benchmarking of long-read assemblers for prokaryote whole genome sequencing [version 1; peer review: 2 approved]

Background: Data sets from long-read sequencing platforms (Oxford Nanopore Technologies and Pacific Biosciences) allow for most prokaryote genomes to be completely assembled – one contig per chromosome or plasmid. However, the high per-read error rate of long-read sequencing necessitates different a...

Full description

Bibliographic Details
Main Authors: Ryan R. Wick, Kathryn E. Holt
Format: Article
Language:English
Published: F1000 Research Ltd 2019-12-01
Series:F1000Research
Online Access:https://f1000research.com/articles/8-2138/v1