Fast and efficient Rmap assembly using the Bi-labelled de Bruijn graph

Abstract Genome wide optical maps are high resolution restriction maps that give a unique numeric representation to a genome. They are produced by assembling hundreds of thousands of single molecule optical maps, which are called Rmaps. Unfortunately, there are very few choices for assembling Rmap d...

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Bibliographic Details
Main Authors: Kingshuk Mukherjee, Massimiliano Rossi, Leena Salmela, Christina Boucher
Format: Article
Language:English
Published: BMC 2021-05-01
Series:Algorithms for Molecular Biology
Subjects:
Online Access:https://doi.org/10.1186/s13015-021-00182-9