Canary: an atomic pipeline for clinical amplicon assays

Canary: an atomic pipeline for clinical amplicon assays

Abstract Background High throughput sequencing requires bioinformatics pipelines to process large volumes of data into meaningful variants that can be translated into a clinical report. These pipelines often suffer from a number of shortcomings: they lack robustness and have many components written...

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Bibliographic Details
Main Authors: Kenneth D. Doig, Jason Ellul, Andrew Fellowes, Ella R. Thompson, Georgina Ryland, Piers Blombery, Anthony T. Papenfuss, Stephen B. Fox
Format: Article
Language:English
Published: BMC 2017-12-01
Series:BMC Bioinformatics
Subjects:
Targeted sequencing
Canary
PathOS
Pipelines
Clinical diagnostics
Variant calling
Online Access:http://link.springer.com/article/10.1186/s12859-017-1950-z

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http://link.springer.com/article/10.1186/s12859-017-1950-z

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