Validation study of genetic biomarkers of response to TNF inhibitors in rheumatoid arthritis.

Genetic biomarkers are sought to personalize treatment of patients with rheumatoid arthritis (RA), given their variable response to TNF inhibitors (TNFi). However, no genetic biomaker is yet sufficiently validated. Here, we report a validation study of 18 previously reported genetic biomarkers, incl...

Full description

Bibliographic Details
Main Authors: Rosario Lopez-Rodriguez, Eva Perez-Pampin, Ana Marquez, Francisco J Blanco, Beatriz Joven, Patricia Carreira, Miguel Angel Ferrer, Rafael Caliz, Lara Valor, Javier Narvaez, Juan D Cañete, Maria Del Carmen Ordoñez, Sara Manrique-Arija, Yiannis Vasilopoulos, Alejandro Balsa, Dora Pascual-Salcedo, Manuel J Moreno-Ramos, Juan Jose Alegre-Sancho, Federico Navarro-Sarabia, Virginia Moreira, Rosa Garcia-Portales, Enrique Raya, Cesar Magro-Checa, Javier Martin, Juan J Gomez-Reino, Antonio Gonzalez
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2018-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC5937760?pdf=render
id doaj-81eb385d7e2649958830718e9afb63b9
record_format Article
spelling doaj-81eb385d7e2649958830718e9afb63b92020-11-25T02:47:06ZengPublic Library of Science (PLoS)PLoS ONE1932-62032018-01-01135e019679310.1371/journal.pone.0196793Validation study of genetic biomarkers of response to TNF inhibitors in rheumatoid arthritis.Rosario Lopez-RodriguezEva Perez-PampinAna MarquezFrancisco J BlancoBeatriz JovenPatricia CarreiraMiguel Angel FerrerRafael CalizLara ValorJavier NarvaezJuan D CañeteMaria Del Carmen OrdoñezSara Manrique-ArijaYiannis VasilopoulosAlejandro BalsaDora Pascual-SalcedoManuel J Moreno-RamosJuan Jose Alegre-SanchoFederico Navarro-SarabiaVirginia MoreiraRosa Garcia-PortalesEnrique RayaCesar Magro-ChecaJavier MartinJuan J Gomez-ReinoAntonio GonzalezGenetic biomarkers are sought to personalize treatment of patients with rheumatoid arthritis (RA), given their variable response to TNF inhibitors (TNFi). However, no genetic biomaker is yet sufficiently validated. Here, we report a validation study of 18 previously reported genetic biomarkers, including 11 from GWAS of response to TNFi. The validation was attempted in 581 patients with RA that had not been treated with biologic antirheumatic drugs previously. Their response to TNFi was evaluated at 3, 6 and 12 months in two ways: change in the DAS28 measure of disease activity, and according to the EULAR criteria for response to antirheumatic drugs. Association of these parameters with the genotypes, obtained by PCR amplification followed by single-base extension, was tested with regression analysis. These analyses were adjusted for baseline DAS28, sex, and the specific TNFi. However, none of the proposed biomarkers was validated, as none showed association with response to TNFi in our study, even at the time of assessment and with the outcome that showed the most significant result in previous studies. These negative results are notable because this was the first independent validation study for 12 of the biomarkers, and because they indicate that prudence is needed in the interpretation of the proposed biomarkers of response to TNFi even when they are supported by very low p values. The results also emphasize the requirement of independent replication for validation, and the need to search protocols that could increase reproducibility of the biomarkers of response to TNFi.http://europepmc.org/articles/PMC5937760?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Rosario Lopez-Rodriguez
Eva Perez-Pampin
Ana Marquez
Francisco J Blanco
Beatriz Joven
Patricia Carreira
Miguel Angel Ferrer
Rafael Caliz
Lara Valor
Javier Narvaez
Juan D Cañete
Maria Del Carmen Ordoñez
Sara Manrique-Arija
Yiannis Vasilopoulos
Alejandro Balsa
Dora Pascual-Salcedo
Manuel J Moreno-Ramos
Juan Jose Alegre-Sancho
Federico Navarro-Sarabia
Virginia Moreira
Rosa Garcia-Portales
Enrique Raya
Cesar Magro-Checa
Javier Martin
Juan J Gomez-Reino
Antonio Gonzalez
spellingShingle Rosario Lopez-Rodriguez
Eva Perez-Pampin
Ana Marquez
Francisco J Blanco
Beatriz Joven
Patricia Carreira
Miguel Angel Ferrer
Rafael Caliz
Lara Valor
Javier Narvaez
Juan D Cañete
Maria Del Carmen Ordoñez
Sara Manrique-Arija
Yiannis Vasilopoulos
Alejandro Balsa
Dora Pascual-Salcedo
Manuel J Moreno-Ramos
Juan Jose Alegre-Sancho
Federico Navarro-Sarabia
Virginia Moreira
Rosa Garcia-Portales
Enrique Raya
Cesar Magro-Checa
Javier Martin
Juan J Gomez-Reino
Antonio Gonzalez
Validation study of genetic biomarkers of response to TNF inhibitors in rheumatoid arthritis.
PLoS ONE
author_facet Rosario Lopez-Rodriguez
Eva Perez-Pampin
Ana Marquez
Francisco J Blanco
Beatriz Joven
Patricia Carreira
Miguel Angel Ferrer
Rafael Caliz
Lara Valor
Javier Narvaez
Juan D Cañete
Maria Del Carmen Ordoñez
Sara Manrique-Arija
Yiannis Vasilopoulos
Alejandro Balsa
Dora Pascual-Salcedo
Manuel J Moreno-Ramos
Juan Jose Alegre-Sancho
Federico Navarro-Sarabia
Virginia Moreira
Rosa Garcia-Portales
Enrique Raya
Cesar Magro-Checa
Javier Martin
Juan J Gomez-Reino
Antonio Gonzalez
author_sort Rosario Lopez-Rodriguez
title Validation study of genetic biomarkers of response to TNF inhibitors in rheumatoid arthritis.
title_short Validation study of genetic biomarkers of response to TNF inhibitors in rheumatoid arthritis.
title_full Validation study of genetic biomarkers of response to TNF inhibitors in rheumatoid arthritis.
title_fullStr Validation study of genetic biomarkers of response to TNF inhibitors in rheumatoid arthritis.
title_full_unstemmed Validation study of genetic biomarkers of response to TNF inhibitors in rheumatoid arthritis.
title_sort validation study of genetic biomarkers of response to tnf inhibitors in rheumatoid arthritis.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2018-01-01
description Genetic biomarkers are sought to personalize treatment of patients with rheumatoid arthritis (RA), given their variable response to TNF inhibitors (TNFi). However, no genetic biomaker is yet sufficiently validated. Here, we report a validation study of 18 previously reported genetic biomarkers, including 11 from GWAS of response to TNFi. The validation was attempted in 581 patients with RA that had not been treated with biologic antirheumatic drugs previously. Their response to TNFi was evaluated at 3, 6 and 12 months in two ways: change in the DAS28 measure of disease activity, and according to the EULAR criteria for response to antirheumatic drugs. Association of these parameters with the genotypes, obtained by PCR amplification followed by single-base extension, was tested with regression analysis. These analyses were adjusted for baseline DAS28, sex, and the specific TNFi. However, none of the proposed biomarkers was validated, as none showed association with response to TNFi in our study, even at the time of assessment and with the outcome that showed the most significant result in previous studies. These negative results are notable because this was the first independent validation study for 12 of the biomarkers, and because they indicate that prudence is needed in the interpretation of the proposed biomarkers of response to TNFi even when they are supported by very low p values. The results also emphasize the requirement of independent replication for validation, and the need to search protocols that could increase reproducibility of the biomarkers of response to TNFi.
url http://europepmc.org/articles/PMC5937760?pdf=render
work_keys_str_mv AT rosariolopezrodriguez validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT evaperezpampin validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT anamarquez validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT franciscojblanco validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT beatrizjoven validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT patriciacarreira validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT miguelangelferrer validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT rafaelcaliz validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT laravalor validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT javiernarvaez validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT juandcanete validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT mariadelcarmenordonez validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT saramanriquearija validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT yiannisvasilopoulos validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT alejandrobalsa validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT dorapascualsalcedo validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT manueljmorenoramos validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT juanjosealegresancho validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT federiconavarrosarabia validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT virginiamoreira validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT rosagarciaportales validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT enriqueraya validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT cesarmagrocheca validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT javiermartin validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT juanjgomezreino validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
AT antoniogonzalez validationstudyofgeneticbiomarkersofresponsetotnfinhibitorsinrheumatoidarthritis
_version_ 1724754523071709184