Evaluation of variant calling tools for large plant genome re-sequencing

Evaluation of variant calling tools for large plant genome re-sequencing

Abstract Background Discovering single nucleotide polymorphisms (SNPs) from agriculture crop genome sequences has been a widely used strategy for developing genetic markers for several applications including marker-assisted breeding, population diversity studies for eco-geographical adaption, genoty...

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Bibliographic Details
Main Authors: Zhen Yao, Frank M. You, Amidou N’Diaye, Ron E. Knox, Curt McCartney, Colin W. Hiebert, Curtis Pozniak, Wayne Xu
Format: Article
Language:English
Published: BMC 2020-08-01
Series:BMC Bioinformatics
Subjects:
Variant calling
Sequence mapping tools
Variant calling tools
Tool evaluation
Wheat exome capture sequences
Online Access:http://link.springer.com/article/10.1186/s12859-020-03704-1

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http://link.springer.com/article/10.1186/s12859-020-03704-1

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