Discovery of stress responsive DNA regulatory motifs in Arabidopsis.

The discovery of DNA regulatory motifs in the sequenced genomes using computational methods remains challenging. Here, we present MotifIndexer--a comprehensive strategy for de novo identification of DNA regulatory motifs at a genome level. Using word-counting methods, we indexed the existence of eve...

Full description

Bibliographic Details
Main Authors: Shisong Ma, Shawn Bachan, Matthew Porto, Hans J Bohnert, Michael Snyder, Savithramma P Dinesh-Kumar
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2012-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3418279?pdf=render