Comparative Analysis of CNV Calling Algorithms: Literature Survey and a Case Study Using Bovine High-Density SNP Data

Comparative Analysis of CNV Calling Algorithms: Literature Survey and a Case Study Using Bovine High-Density SNP Data

Copy number variations (CNVs) are gains and losses of genomic sequence between two individuals of a species when compared to a reference genome. The data from single nucleotide polymorphism (SNP) microarrays are now routinely used for genotyping, but they also can be utilized for copy number detecti...

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Bibliographic Details
Main Authors: George E. Liu, Derek M. Bickhart, Jiuzhou Song, Yali Hou, Lingyang Xu
Format: Article
Language:English
Published: MDPI AG 2013-06-01
Series:Microarrays
Subjects:
copy number variation (CNV)
algorithm
segmental duplication
single nucleotide polymorphism (SNP)
cattle genome
Online Access:http://www.mdpi.com/2076-3905/2/3/171

Internet

http://www.mdpi.com/2076-3905/2/3/171

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