Synthetic production of prenylated naringenins in yeast using promiscuous microbial prenyltransferases

Reconstitution of prenylflavonoids using the flavonoid biosynthetic pathway and prenyltransferases (PTs) in microbes can be a promising attractive alternative to plant-based production or chemical synthesis. Here, we demonstrate that promiscuous microbial PTs can be a substitute for regiospecific bu...

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Main Authors: Shota Isogai, Nobuyuki Okahashi, Ririka Asama, Tomomi Nakamura, Tomohisa Hasunuma, Fumio Matsuda, Jun Ishii, Akihiko Kondo
Format: Article
Language:English
Published: Elsevier 2021-06-01
Series:Metabolic Engineering Communications
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2214030121000092
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language English
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author Shota Isogai
Nobuyuki Okahashi
Ririka Asama
Tomomi Nakamura
Tomohisa Hasunuma
Fumio Matsuda
Jun Ishii
Akihiko Kondo
spellingShingle Shota Isogai
Nobuyuki Okahashi
Ririka Asama
Tomomi Nakamura
Tomohisa Hasunuma
Fumio Matsuda
Jun Ishii
Akihiko Kondo
Synthetic production of prenylated naringenins in yeast using promiscuous microbial prenyltransferases
Metabolic Engineering Communications
Prenylnaringenin
Prenyltransferase
Naringenin
Prenylflavonoids
Yeast
author_facet Shota Isogai
Nobuyuki Okahashi
Ririka Asama
Tomomi Nakamura
Tomohisa Hasunuma
Fumio Matsuda
Jun Ishii
Akihiko Kondo
author_sort Shota Isogai
title Synthetic production of prenylated naringenins in yeast using promiscuous microbial prenyltransferases
title_short Synthetic production of prenylated naringenins in yeast using promiscuous microbial prenyltransferases
title_full Synthetic production of prenylated naringenins in yeast using promiscuous microbial prenyltransferases
title_fullStr Synthetic production of prenylated naringenins in yeast using promiscuous microbial prenyltransferases
title_full_unstemmed Synthetic production of prenylated naringenins in yeast using promiscuous microbial prenyltransferases
title_sort synthetic production of prenylated naringenins in yeast using promiscuous microbial prenyltransferases
publisher Elsevier
series Metabolic Engineering Communications
issn 2214-0301
publishDate 2021-06-01
description Reconstitution of prenylflavonoids using the flavonoid biosynthetic pathway and prenyltransferases (PTs) in microbes can be a promising attractive alternative to plant-based production or chemical synthesis. Here, we demonstrate that promiscuous microbial PTs can be a substitute for regiospecific but mostly unidentified botanical PTs. To test the prenylations of naringenin, we constructed a yeast strain capable of producing naringenin from l-phenylalanine by genomic integration of six exogenous genes encoding components of the naringenin biosynthetic pathway. Using this platform strain, various microbial PTs were tested for prenylnaringenin production. In vitro screening demonstrated that the fungal AnaPT (a member of the tryptophan dimethylallyltransferase family) specifically catalyzed C-3′ prenylation of naringenin, whereas SfN8DT-1, a botanical PT, specifically catalyzed C-8 prenylation. In vivo, the naringenin-producing strain expressing the microbial AnaPT exhibited heterologous microbial production of 3′-prenylnaringenin (3′-PN), in contrast to the previously reported in vivo production of 8-prenylnaringenin (8-PN) using the botanical SfN8DT-1. These findings provide strategies towards expanding the production of a variety of prenylated compounds, including well-known prenylnaringenins and novel prenylflavonoids. These results also suggest the opportunity for substituting botanical PTs, both known and unidentified, that display relatively strict regiospecificity of the prenyl group transfer.
topic Prenylnaringenin
Prenyltransferase
Naringenin
Prenylflavonoids
Yeast
url http://www.sciencedirect.com/science/article/pii/S2214030121000092
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spelling doaj-89ab52b2946141c69be1255b6649bb392021-06-05T06:09:13ZengElsevierMetabolic Engineering Communications2214-03012021-06-0112e00169Synthetic production of prenylated naringenins in yeast using promiscuous microbial prenyltransferasesShota Isogai0Nobuyuki Okahashi1Ririka Asama2Tomomi Nakamura3Tomohisa Hasunuma4Fumio Matsuda5Jun Ishii6Akihiko Kondo7Graduate School of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan; Technology Research Association of Highly Efficient Gene Design (TRAHED), Kobe, JapanDepartment of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, JapanGraduate School of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, JapanGraduate School of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan; Technology Research Association of Highly Efficient Gene Design (TRAHED), Kobe, JapanGraduate School of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan; Technology Research Association of Highly Efficient Gene Design (TRAHED), Kobe, Japan; Engineering Biology Research Center, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, JapanDepartment of Bioinformatic Engineering, Graduate School of Information Science and Technology, Osaka University, 1-5 Yamadaoka, Suita, Osaka, 565-0871, JapanGraduate School of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan; Technology Research Association of Highly Efficient Gene Design (TRAHED), Kobe, Japan; Engineering Biology Research Center, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan; Corresponding author. Engineering Biology Research Center, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan.Graduate School of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan; Technology Research Association of Highly Efficient Gene Design (TRAHED), Kobe, Japan; Engineering Biology Research Center, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan; Department of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan; Center for Sustainable Resource Science, RIKEN, 1-7-22 Suehiro, Tsurumi, Yokohama, 230-0045, Japan; Corresponding author. Graduate School of Science, Technology and Innovation, Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan.Reconstitution of prenylflavonoids using the flavonoid biosynthetic pathway and prenyltransferases (PTs) in microbes can be a promising attractive alternative to plant-based production or chemical synthesis. Here, we demonstrate that promiscuous microbial PTs can be a substitute for regiospecific but mostly unidentified botanical PTs. To test the prenylations of naringenin, we constructed a yeast strain capable of producing naringenin from l-phenylalanine by genomic integration of six exogenous genes encoding components of the naringenin biosynthetic pathway. Using this platform strain, various microbial PTs were tested for prenylnaringenin production. In vitro screening demonstrated that the fungal AnaPT (a member of the tryptophan dimethylallyltransferase family) specifically catalyzed C-3′ prenylation of naringenin, whereas SfN8DT-1, a botanical PT, specifically catalyzed C-8 prenylation. In vivo, the naringenin-producing strain expressing the microbial AnaPT exhibited heterologous microbial production of 3′-prenylnaringenin (3′-PN), in contrast to the previously reported in vivo production of 8-prenylnaringenin (8-PN) using the botanical SfN8DT-1. These findings provide strategies towards expanding the production of a variety of prenylated compounds, including well-known prenylnaringenins and novel prenylflavonoids. These results also suggest the opportunity for substituting botanical PTs, both known and unidentified, that display relatively strict regiospecificity of the prenyl group transfer.http://www.sciencedirect.com/science/article/pii/S2214030121000092PrenylnaringeninPrenyltransferaseNaringeninPrenylflavonoidsYeast