The application of high-throughput sequencing technology to analysis of amoA phylogeny and environmental niche specialisation of terrestrial bacterial ammonia-oxidisers

The application of high-throughput sequencing technology to analysis of amoA phylogeny and environmental niche specialisation of terrestrial bacterial ammonia-oxidisers

Abstract Background Characterisation of microbial communities increasingly involves use of high throughput sequencing methods (e.g. MiSeq Illumina) that amplify relatively short sequences of 16S rRNA or functional genes, the latter including ammonia monooxygenase subunit A (amoA), a key functional g...

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Bibliographic Details
Main Authors: Axel Aigle, James I. Prosser, Cécile Gubry-Rangin
Format: Article
Language:English
Published: BMC 2019-07-01
Series:Environmental Microbiome
Subjects:
Nitrification
amoA
16S rRNA
Archaea
Bacteria
Illumina MiSeq
Online Access:http://link.springer.com/article/10.1186/s40793-019-0342-6

Internet

http://link.springer.com/article/10.1186/s40793-019-0342-6

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