Spectral Jaccard Similarity: A New Approach to Estimating Pairwise Sequence Alignments
Summary: Pairwise sequence alignment is often a computational bottleneck in genomic analysis pipelines, particularly in the context of third-generation sequencing technologies. To speed up this process, the pairwise k-mer Jaccard similarity is sometimes used as a proxy for alignment size in order to...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2020-09-01
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| Series: | Patterns |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2666389920301094 |