A multi-task convolutional deep neural network for variant calling in single molecule sequencing

Single Molecule Sequencing (SMS) technologies generate long but noisy reads data. Here, the authors develop Clairvoyante, a deep neural network-based method for variant calling with SMS reads such as PacBio and ONT data.

Bibliographic Details
Main Authors: Ruibang Luo, Fritz J. Sedlazeck, Tak-Wah Lam, Michael C. Schatz
Format: Article
Language:English
Published: Nature Publishing Group 2019-03-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-019-09025-z