SVXplorer: Three-tier approach to identification of structural variants via sequential recombination of discordant cluster signatures.

The identification of structural variants using short-read data remains challenging. Most approaches that use discordant paired-end sequences ignore non-trivial signatures presented by variants containing 3 breakpoints, such as those generated by various copy-paste and cut-paste mechanisms. This can...

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Bibliographic Details
Main Authors: Kunal Kathuria, Aakrosh Ratan
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2020-03-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1007737