Polymer uncrossing and knotting in protein folding, and their role in minimal folding pathways.

We introduce a method for calculating the extent to which chain non-crossing is important in the most efficient, optimal trajectories or pathways for a protein to fold. This involves recording all unphysical crossing events of a ghost chain, and calculating the minimal uncrossing cost that would hav...

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Bibliographic Details
Main Authors: Ali R Mohazab, Steven S Plotkin
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2013-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3554774?pdf=render