UMI-count modeling and differential expression analysis for single-cell RNA sequencing

Abstract Read counting and unique molecular identifier (UMI) counting are the principal gene expression quantification schemes used in single-cell RNA-sequencing (scRNA-seq) analysis. By using multiple scRNA-seq datasets, we reveal distinct distribution differences between these schemes and conclude...

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Bibliographic Details
Main Authors: Wenan Chen, Yan Li, John Easton, David Finkelstein, Gang Wu, Xiang Chen
Format: Article
Language:English
Published: BMC 2018-05-01
Series:Genome Biology
Subjects:
Online Access:http://link.springer.com/article/10.1186/s13059-018-1438-9