HPeak: an HMM-based algorithm for defining read-enriched regions in ChIP-Seq data

<p>Abstract</p> <p>Background</p> <p>Protein-DNA interaction constitutes a basic mechanism for the genetic regulation of target gene expression. Deciphering this mechanism has been a daunting task due to the difficulty in characterizing protein-bound DNA on a large scal...

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Bibliographic Details
Main Authors: Maher Christopher A, Shen Jincheng, Yu Jianjun, Qin Zhaohui S, Hu Ming, Kalyana-Sundaram Shanker, Yu Jindan, Chinnaiyan Arul M
Format: Article
Language:English
Published: BMC 2010-07-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/11/369