Inference of splicing regulatory activities by sequence neighborhood analysis.

Sequence-specific recognition of nucleic-acid motifs is critical to many cellular processes. We have developed a new and general method called Neighborhood Inference (NI) that predicts sequences with activity in regulating a biochemical process based on the local density of known sites in sequence s...

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Bibliographic Details
Main Authors: Michael B Stadler, Noam Shomron, Gene W Yeo, Aniket Schneider, Xinshu Xiao, Christopher B Burge
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2006-11-01
Series:PLoS Genetics
Online Access:http://europepmc.org/articles/PMC1657047?pdf=render