Phylogenetic Analysis of HIV-1 Genomes Based on the Position-Weighted K-mers Method

Phylogenetic Analysis of HIV-1 Genomes Based on the Position-Weighted K-mers Method

HIV-1 viruses, which are predominant in the family of HIV viruses, have strong pathogenicity and infectivity. They can evolve into many different variants in a very short time. In this study, we propose a new and effective alignment-free method for the phylogenetic analysis of HIV-1 viruses using co...

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Bibliographic Details
Main Authors: Yuanlin Ma, Zuguo Yu, Runbin Tang, Xianhua Xie, Guosheng Han, Vo V. Anh
Format: Article
Language:English
Published: MDPI AG 2020-02-01
Series:Entropy
Subjects:
alignment-free
hiv-1 virus
phylogenetic analysis
position-weighted <i>k</i>-mers
robinson–foulds distance
Online Access:https://www.mdpi.com/1099-4300/22/2/255

Internet

https://www.mdpi.com/1099-4300/22/2/255

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