Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes

Exploring structural variation and gene family architecture with De Novo assemblies of 15 Medicago genomes

Abstract Background Previous studies exploring sequence variation in the model legume, Medicago truncatula, relied on mapping short reads to a single reference. However, read-mapping approaches are inadequate to examine large, diverse gene families or to probe variation in repeat-rich or highly dive...

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Bibliographic Details
Main Authors: Peng Zhou, Kevin A. T. Silverstein, Thiruvarangan Ramaraj, Joseph Guhlin, Roxanne Denny, Junqi Liu, Andrew D. Farmer, Kelly P. Steele, Robert M. Stupar, Jason R. Miller, Peter Tiffin, Joann Mudge, Nevin D. Young
Format: Article
Language:English
Published: BMC 2017-03-01
Series:BMC Genomics
Subjects:
Ortholog Group
Syntenic Block
Short InDels
Dispensable Genome
Pairwise Genome Comparison
Online Access:http://link.springer.com/article/10.1186/s12864-017-3654-1

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http://link.springer.com/article/10.1186/s12864-017-3654-1

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