restfulSE: A semantically rich interface for cloud-scale genomics with Bioconductor [version 1; referees: 2 approved]

Bioconductor's SummarizedExperiment class unites numerical assay quantifications with sample- and experiment-level metadata.  SummarizedExperiment is the standard Bioconductor class for assays that produce matrix-like data, used by over 200 packages.  We describe the restfulSE package, a deploy...

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Bibliographic Details
Main Authors: Shweta Gopaulakrishnan, Samuela Pollack, BJ Stubbs, Hervé Pagès, John Readey, Sean Davis, Levi Waldron, Martin Morgan, Vincent Carey
Format: Article
Language:English
Published: F1000 Research Ltd 2019-01-01
Series:F1000Research
Online Access:https://f1000research.com/articles/8-21/v1