SQUID: transcriptomic structural variation detection from RNA-seq
Abstract Transcripts are frequently modified by structural variations, which lead to fused transcripts of either multiple genes, known as a fusion gene, or a gene and a previously non-transcribed sequence. Detecting these modifications, called transcriptomic structural variations (TSVs), especially...
Main Authors: | Cong Ma, Mingfu Shao, Carl Kingsford |
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Format: | Article |
Language: | English |
Published: |
BMC
2018-04-01
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Series: | Genome Biology |
Subjects: | |
Online Access: | http://link.springer.com/article/10.1186/s13059-018-1421-5 |
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