Lysyl oxidase polymorphisms and susceptibility to osteosarcoma.

Despite the knowledge of many genetic alterations present in osteosarcoma, the complexity of this disease precludes placing its biology into a simple conceptual framework. Lysyl oxidase (LOX) catalyzes the cross-linking of elastin and collagen, which is essential for the structural integrity and fun...

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Main Authors: Yang Liu, Bitao Lv, Zhimin He, Yujia Zhou, Carrie Han, Guodong Shi, Rui Gao, Ce Wang, Lili Yang, Haihan Song, Wen Yuan
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2012-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3402457?pdf=render
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spelling doaj-aeba5a7b07484b52908f547e530e73dc2020-11-25T02:32:26ZengPublic Library of Science (PLoS)PLoS ONE1932-62032012-01-0177e4161010.1371/journal.pone.0041610Lysyl oxidase polymorphisms and susceptibility to osteosarcoma.Yang LiuBitao LvZhimin HeYujia ZhouCarrie HanGuodong ShiRui GaoCe WangLili YangHaihan SongWen YuanDespite the knowledge of many genetic alterations present in osteosarcoma, the complexity of this disease precludes placing its biology into a simple conceptual framework. Lysyl oxidase (LOX) catalyzes the cross-linking of elastin and collagen, which is essential for the structural integrity and function of bone tissue. In the current study, we performed genomic sequencing on all seven exons--including the intron-exon splice sites, and the putative promoter region of LOX gene--followed by luciferase reporter assay to analyze the function of newly identified polymorphisms. Associations between LOX polymorphisms and osteosarcoma were then evaluated. Our sequencing data revealed three polymorphisms (-22G/C, 225C/G, and 473G/A) in the exons and promoter region of LOX. The -22G/C polymorphism lies in the downstream core promoter element (DPE) region and caused a decrease in promoter activity of LOX. The prevalence of the -22C allele and 473A allele were significantly increased in osteosarcoma patients compared to controls (odds ratio [OR] = 3.88, 95% confidence interval [CI]= 1.94-7.78, p = 4.18×10(-5), and OR = 1.38, 95%CI = 1.07-1.78, p = 0.013; p 0.0167 was considered significant after Bonferroni correction). Analyzing haplotype showed that the frequency of CCG haplotype (-22, 225, 473) was significantly higher in osteosarcoma cases than in healthy controls after Bonferroni correction (p = 4.46×10(-4)). These results indicate that the -22G/C polymorphism may affect the expression of LOX, and that -22G/C and 473G/A polymorphisms may be new risk factors for osteosarcoma. These findings reveal a potential new pathway by which genetic polymorphisms may affect human diseases.http://europepmc.org/articles/PMC3402457?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Yang Liu
Bitao Lv
Zhimin He
Yujia Zhou
Carrie Han
Guodong Shi
Rui Gao
Ce Wang
Lili Yang
Haihan Song
Wen Yuan
spellingShingle Yang Liu
Bitao Lv
Zhimin He
Yujia Zhou
Carrie Han
Guodong Shi
Rui Gao
Ce Wang
Lili Yang
Haihan Song
Wen Yuan
Lysyl oxidase polymorphisms and susceptibility to osteosarcoma.
PLoS ONE
author_facet Yang Liu
Bitao Lv
Zhimin He
Yujia Zhou
Carrie Han
Guodong Shi
Rui Gao
Ce Wang
Lili Yang
Haihan Song
Wen Yuan
author_sort Yang Liu
title Lysyl oxidase polymorphisms and susceptibility to osteosarcoma.
title_short Lysyl oxidase polymorphisms and susceptibility to osteosarcoma.
title_full Lysyl oxidase polymorphisms and susceptibility to osteosarcoma.
title_fullStr Lysyl oxidase polymorphisms and susceptibility to osteosarcoma.
title_full_unstemmed Lysyl oxidase polymorphisms and susceptibility to osteosarcoma.
title_sort lysyl oxidase polymorphisms and susceptibility to osteosarcoma.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2012-01-01
description Despite the knowledge of many genetic alterations present in osteosarcoma, the complexity of this disease precludes placing its biology into a simple conceptual framework. Lysyl oxidase (LOX) catalyzes the cross-linking of elastin and collagen, which is essential for the structural integrity and function of bone tissue. In the current study, we performed genomic sequencing on all seven exons--including the intron-exon splice sites, and the putative promoter region of LOX gene--followed by luciferase reporter assay to analyze the function of newly identified polymorphisms. Associations between LOX polymorphisms and osteosarcoma were then evaluated. Our sequencing data revealed three polymorphisms (-22G/C, 225C/G, and 473G/A) in the exons and promoter region of LOX. The -22G/C polymorphism lies in the downstream core promoter element (DPE) region and caused a decrease in promoter activity of LOX. The prevalence of the -22C allele and 473A allele were significantly increased in osteosarcoma patients compared to controls (odds ratio [OR] = 3.88, 95% confidence interval [CI]= 1.94-7.78, p = 4.18×10(-5), and OR = 1.38, 95%CI = 1.07-1.78, p = 0.013; p 0.0167 was considered significant after Bonferroni correction). Analyzing haplotype showed that the frequency of CCG haplotype (-22, 225, 473) was significantly higher in osteosarcoma cases than in healthy controls after Bonferroni correction (p = 4.46×10(-4)). These results indicate that the -22G/C polymorphism may affect the expression of LOX, and that -22G/C and 473G/A polymorphisms may be new risk factors for osteosarcoma. These findings reveal a potential new pathway by which genetic polymorphisms may affect human diseases.
url http://europepmc.org/articles/PMC3402457?pdf=render
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