DotAligner: identification and clustering of RNA structure motifs

DotAligner: identification and clustering of RNA structure motifs

Abstract The diversity of processed transcripts in eukaryotic genomes poses a challenge for the classification of their biological functions. Sparse sequence conservation in non-coding sequences and the unreliable nature of RNA structure predictions further exacerbate this conundrum. Here, we descri...

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Bibliographic Details
Main Authors: Martin A. Smith, Stefan E. Seemann, Xiu Cheng Quek, John S. Mattick
Format: Article
Language:English
Published: BMC 2017-12-01
Series:Genome Biology
Subjects:
Functions of RNA structures
RNA structure clustering
Machine learning
RNA–protein interactions
Functional genome annotation
Regulation by non-coding RNAs
Online Access:http://link.springer.com/article/10.1186/s13059-017-1371-3

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http://link.springer.com/article/10.1186/s13059-017-1371-3

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