TaxMapper: an analysis tool, reference database and workflow for metatranscriptome analysis of eukaryotic microorganisms

TaxMapper: an analysis tool, reference database and workflow for metatranscriptome analysis of eukaryotic microorganisms

Abstract Background High-throughput sequencing (HTS) technologies are increasingly applied to analyse complex microbial ecosystems by mRNA sequencing of whole communities, also known as metatranscriptome sequencing. This approach is at the moment largely limited to prokaryotic communities and commun...

Full description

Bibliographic Details
Main Authors: Daniela Beisser, Nadine Graupner, Lars Grossmann, Henning Timm, Jens Boenigk, Sven Rahmann
Format: Article
Language:English
Published: BMC 2017-10-01
Series:BMC Genomics
Subjects:
Metatranscriptome analysis
Taxonomic assignment
Protists
Online Access:http://link.springer.com/article/10.1186/s12864-017-4168-6

Internet

http://link.springer.com/article/10.1186/s12864-017-4168-6

Similar Items