Optimizing de novo genome assembly from PCR-amplified metagenomes

Optimizing de novo genome assembly from PCR-amplified metagenomes

Background Metagenomics has transformed our understanding of microbial diversity across ecosystems, with recent advances enabling de novo assembly of genomes from metagenomes. These metagenome-assembled genomes are critical to provide ecological, evolutionary, and metabolic context for all the micro...

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Bibliographic Details
Main Authors: Simon Roux, Gareth Trubl, Danielle Goudeau, Nandita Nath, Estelle Couradeau, Nathan A. Ahlgren, Yuanchao Zhan, David Marsan, Feng Chen, Jed A. Fuhrman, Trent R. Northen, Matthew B. Sullivan, Virginia I. Rich, Rex R. Malmstrom, Emiley A. Eloe-Fadrosh
Format: Article
Language:English
Published: PeerJ Inc. 2019-05-01
Series:PeerJ
Subjects:
Metagenomics
Microbial ecology
Genome assembly
Viral metagenomics
Online Access:https://peerj.com/articles/6902.pdf

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https://peerj.com/articles/6902.pdf

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