BLVector: Fast BLAST-Like Algorithm for Manycore CPU With Vectorization

New High-Performance Computing architectures have been recently developed for commercial central processing unit (CPU). Yet, that has not improved the execution time of widely used bioinformatics applications, like BLAST+. This is due to a lack of optimization between the bases of the existing algor...

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Bibliographic Details
Main Authors: Sergio Gálvez, Federico Agostini, Javier Caselli, Pilar Hernandez, Gabriel Dorado
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-02-01
Series:Frontiers in Genetics
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fgene.2021.618659/full