The diagnosis of tuberculous meningitis in adults and adolescents: protocol for a systematic review and individual patient data meta-analysis to inform a multivariable prediction model [version 3; peer review: 2 approved]

Background: Tuberculous meningitis (TBM) is the most lethal and disabling form of tuberculosis. Delayed diagnosis and treatment, which is a risk factor for poor outcome, is caused in part by lack of availability of diagnostic tests that are both rapid and accurate. Several attempts have been made to...

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Main Authors: Tom Boyles, Anna Stadelman, Jayne P. Ellis, Fiona V. Cresswell, Vittoria Lutje, Sean Wasserman, Nicki Tiffin, Robert Wilkinson
Format: Article
Language:English
Published: Wellcome 2021-01-01
Series:Wellcome Open Research
Online Access:https://wellcomeopenresearch.org/articles/4-19/v3
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spelling doaj-b862774b996b4eb3b3f72f5c97c39fe12021-02-09T14:43:38ZengWellcomeWellcome Open Research2398-502X2021-01-01410.12688/wellcomeopenres.15056.318198The diagnosis of tuberculous meningitis in adults and adolescents: protocol for a systematic review and individual patient data meta-analysis to inform a multivariable prediction model [version 3; peer review: 2 approved]Tom Boyles0Anna Stadelman1Jayne P. Ellis2Fiona V. Cresswell3Vittoria Lutje4Sean Wasserman5Nicki Tiffin6Robert Wilkinson7Wits Reproductive Health and HIV Institute, University of the Witwatersrand, Johannesburg, Gauteng, 2001, South AfricaSchool of Public Health, University of Minnesota, Minneapolis, Minnesota, USAHospital for Tropical Diseases, University College London Hospitals NHS Foundation Trust, London, UKClinical Research Department, London School of Hygiene and Tropical Medicine, London, WC1E 7HT, UKCochrane Infectious Diseases Group, University of Liverpool, Liverpool, UKWellcome Centre for Infectious Disease Research in Africa, Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, South AfricaDivision of Computational Biology, Integrative Biomedical Sciences, University of Cape Town, University of Cape, South AfricaWellcome Centre for Infectious Disease Research in Africa, Institute of Infectious Diseases and Molecular Medicine, University of Cape Town, South AfricaBackground: Tuberculous meningitis (TBM) is the most lethal and disabling form of tuberculosis. Delayed diagnosis and treatment, which is a risk factor for poor outcome, is caused in part by lack of availability of diagnostic tests that are both rapid and accurate. Several attempts have been made to develop clinical scoring systems to fill this gap, but none have performed sufficiently well to be broadly implemented. We aim to identify and validate a set of clinical predictors that accurately classify TBM using individual patient data (IPD) from published studies. Methods: We will perform a systematic review and obtain IPD from studies published from the year 1990 which undertook diagnostic testing for TBM in adolescents or adults using at least one of, microscopy for acid-fast bacilli, commercial nucleic acid amplification test for Mycobacterium tuberculosis or mycobacterial culture of cerebrospinal fluid.  Clinical data that have previously been shown to be associated with TBM, and can inform the final diagnosis, will be requested. The data-set will be divided into training and test/validation data-sets for model building. A predictive logistic model will be built using a training set with patients with definite TBM and no TBM. Should it be warranted, factor analysis may be employed, depending on evidence for multicollinearity or the case for including latent variables in the model. Discussion: We will systematically identify and extract key clinical parameters associated with TBM from published studies and use a ‘big data’ approach to develop and validate a clinical prediction model with enhanced generalisability. The final model will be made available through a smartphone application. Further work will be external validation of the model and test of efficacy in a randomised controlled trial.https://wellcomeopenresearch.org/articles/4-19/v3
collection DOAJ
language English
format Article
sources DOAJ
author Tom Boyles
Anna Stadelman
Jayne P. Ellis
Fiona V. Cresswell
Vittoria Lutje
Sean Wasserman
Nicki Tiffin
Robert Wilkinson
spellingShingle Tom Boyles
Anna Stadelman
Jayne P. Ellis
Fiona V. Cresswell
Vittoria Lutje
Sean Wasserman
Nicki Tiffin
Robert Wilkinson
The diagnosis of tuberculous meningitis in adults and adolescents: protocol for a systematic review and individual patient data meta-analysis to inform a multivariable prediction model [version 3; peer review: 2 approved]
Wellcome Open Research
author_facet Tom Boyles
Anna Stadelman
Jayne P. Ellis
Fiona V. Cresswell
Vittoria Lutje
Sean Wasserman
Nicki Tiffin
Robert Wilkinson
author_sort Tom Boyles
title The diagnosis of tuberculous meningitis in adults and adolescents: protocol for a systematic review and individual patient data meta-analysis to inform a multivariable prediction model [version 3; peer review: 2 approved]
title_short The diagnosis of tuberculous meningitis in adults and adolescents: protocol for a systematic review and individual patient data meta-analysis to inform a multivariable prediction model [version 3; peer review: 2 approved]
title_full The diagnosis of tuberculous meningitis in adults and adolescents: protocol for a systematic review and individual patient data meta-analysis to inform a multivariable prediction model [version 3; peer review: 2 approved]
title_fullStr The diagnosis of tuberculous meningitis in adults and adolescents: protocol for a systematic review and individual patient data meta-analysis to inform a multivariable prediction model [version 3; peer review: 2 approved]
title_full_unstemmed The diagnosis of tuberculous meningitis in adults and adolescents: protocol for a systematic review and individual patient data meta-analysis to inform a multivariable prediction model [version 3; peer review: 2 approved]
title_sort diagnosis of tuberculous meningitis in adults and adolescents: protocol for a systematic review and individual patient data meta-analysis to inform a multivariable prediction model [version 3; peer review: 2 approved]
publisher Wellcome
series Wellcome Open Research
issn 2398-502X
publishDate 2021-01-01
description Background: Tuberculous meningitis (TBM) is the most lethal and disabling form of tuberculosis. Delayed diagnosis and treatment, which is a risk factor for poor outcome, is caused in part by lack of availability of diagnostic tests that are both rapid and accurate. Several attempts have been made to develop clinical scoring systems to fill this gap, but none have performed sufficiently well to be broadly implemented. We aim to identify and validate a set of clinical predictors that accurately classify TBM using individual patient data (IPD) from published studies. Methods: We will perform a systematic review and obtain IPD from studies published from the year 1990 which undertook diagnostic testing for TBM in adolescents or adults using at least one of, microscopy for acid-fast bacilli, commercial nucleic acid amplification test for Mycobacterium tuberculosis or mycobacterial culture of cerebrospinal fluid.  Clinical data that have previously been shown to be associated with TBM, and can inform the final diagnosis, will be requested. The data-set will be divided into training and test/validation data-sets for model building. A predictive logistic model will be built using a training set with patients with definite TBM and no TBM. Should it be warranted, factor analysis may be employed, depending on evidence for multicollinearity or the case for including latent variables in the model. Discussion: We will systematically identify and extract key clinical parameters associated with TBM from published studies and use a ‘big data’ approach to develop and validate a clinical prediction model with enhanced generalisability. The final model will be made available through a smartphone application. Further work will be external validation of the model and test of efficacy in a randomised controlled trial.
url https://wellcomeopenresearch.org/articles/4-19/v3
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