Rare copy number variants in over 100,000 European ancestry subjects reveal multiple disease associations

Associations of copy number variations (CNVs) with complex traits are challenging to study because of their low frequency. Here, the authors analyse SNP array and array comparative genomic hybridization data of 100,028 individuals and report their associations with immune-related, cardiometabolic an...

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Main Authors: Yun Rose Li, Joseph T. Glessner, Bradley P. Coe, Jin Li, Maede Mohebnasab, Xiao Chang, John Connolly, Charlly Kao, Zhi Wei, Jonathan Bradfield, Cecilia Kim, Cuiping Hou, Munir Khan, Frank Mentch, Haijun Qiu, Marina Bakay, Christopher Cardinale, Maria Lemma, Debra Abrams, Andrew Bridglall-Jhingoor, Meckenzie Behr, Shanell Harrison, George Otieno, Alexandria Thomas, Fengxiang Wang, Rosetta Chiavacci, Lawrence Wu, Dexter Hadley, Elizabeth Goldmuntz, Josephine Elia, John Maris, Robert Grundmeier, Marcella Devoto, Brendan Keating, Michael March, Renata Pellagrino, Struan F. A. Grant, Patrick M. A. Sleiman, Mingyao Li, Evan E. Eichler, Hakon Hakonarson
Format: Article
Language:English
Published: Nature Publishing Group 2020-01-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-019-13624-1
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author Yun Rose Li
Joseph T. Glessner
Bradley P. Coe
Jin Li
Maede Mohebnasab
Xiao Chang
John Connolly
Charlly Kao
Zhi Wei
Jonathan Bradfield
Cecilia Kim
Cuiping Hou
Munir Khan
Frank Mentch
Haijun Qiu
Marina Bakay
Christopher Cardinale
Maria Lemma
Debra Abrams
Andrew Bridglall-Jhingoor
Meckenzie Behr
Shanell Harrison
George Otieno
Alexandria Thomas
Fengxiang Wang
Rosetta Chiavacci
Lawrence Wu
Dexter Hadley
Elizabeth Goldmuntz
Josephine Elia
John Maris
Robert Grundmeier
Marcella Devoto
Brendan Keating
Michael March
Renata Pellagrino
Struan F. A. Grant
Patrick M. A. Sleiman
Mingyao Li
Evan E. Eichler
Hakon Hakonarson
spellingShingle Yun Rose Li
Joseph T. Glessner
Bradley P. Coe
Jin Li
Maede Mohebnasab
Xiao Chang
John Connolly
Charlly Kao
Zhi Wei
Jonathan Bradfield
Cecilia Kim
Cuiping Hou
Munir Khan
Frank Mentch
Haijun Qiu
Marina Bakay
Christopher Cardinale
Maria Lemma
Debra Abrams
Andrew Bridglall-Jhingoor
Meckenzie Behr
Shanell Harrison
George Otieno
Alexandria Thomas
Fengxiang Wang
Rosetta Chiavacci
Lawrence Wu
Dexter Hadley
Elizabeth Goldmuntz
Josephine Elia
John Maris
Robert Grundmeier
Marcella Devoto
Brendan Keating
Michael March
Renata Pellagrino
Struan F. A. Grant
Patrick M. A. Sleiman
Mingyao Li
Evan E. Eichler
Hakon Hakonarson
Rare copy number variants in over 100,000 European ancestry subjects reveal multiple disease associations
Nature Communications
author_facet Yun Rose Li
Joseph T. Glessner
Bradley P. Coe
Jin Li
Maede Mohebnasab
Xiao Chang
John Connolly
Charlly Kao
Zhi Wei
Jonathan Bradfield
Cecilia Kim
Cuiping Hou
Munir Khan
Frank Mentch
Haijun Qiu
Marina Bakay
Christopher Cardinale
Maria Lemma
Debra Abrams
Andrew Bridglall-Jhingoor
Meckenzie Behr
Shanell Harrison
George Otieno
Alexandria Thomas
Fengxiang Wang
Rosetta Chiavacci
Lawrence Wu
Dexter Hadley
Elizabeth Goldmuntz
Josephine Elia
John Maris
Robert Grundmeier
Marcella Devoto
Brendan Keating
Michael March
Renata Pellagrino
Struan F. A. Grant
Patrick M. A. Sleiman
Mingyao Li
Evan E. Eichler
Hakon Hakonarson
author_sort Yun Rose Li
title Rare copy number variants in over 100,000 European ancestry subjects reveal multiple disease associations
title_short Rare copy number variants in over 100,000 European ancestry subjects reveal multiple disease associations
title_full Rare copy number variants in over 100,000 European ancestry subjects reveal multiple disease associations
title_fullStr Rare copy number variants in over 100,000 European ancestry subjects reveal multiple disease associations
title_full_unstemmed Rare copy number variants in over 100,000 European ancestry subjects reveal multiple disease associations
title_sort rare copy number variants in over 100,000 european ancestry subjects reveal multiple disease associations
publisher Nature Publishing Group
series Nature Communications
issn 2041-1723
publishDate 2020-01-01
description Associations of copy number variations (CNVs) with complex traits are challenging to study because of their low frequency. Here, the authors analyse SNP array and array comparative genomic hybridization data of 100,028 individuals and report their associations with immune-related, cardiometabolic and neuropsychiatric diseases as well as cancer.
url https://doi.org/10.1038/s41467-019-13624-1
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spelling doaj-bff05ccd6ca145f18966c6e073fcf8bb2021-01-31T13:09:00ZengNature Publishing GroupNature Communications2041-17232020-01-011111910.1038/s41467-019-13624-1Rare copy number variants in over 100,000 European ancestry subjects reveal multiple disease associationsYun Rose Li0Joseph T. Glessner1Bradley P. Coe2Jin Li3Maede Mohebnasab4Xiao Chang5John Connolly6Charlly Kao7Zhi Wei8Jonathan Bradfield9Cecilia Kim10Cuiping Hou11Munir Khan12Frank Mentch13Haijun Qiu14Marina Bakay15Christopher Cardinale16Maria Lemma17Debra Abrams18Andrew Bridglall-Jhingoor19Meckenzie Behr20Shanell Harrison21George Otieno22Alexandria Thomas23Fengxiang Wang24Rosetta Chiavacci25Lawrence Wu26Dexter Hadley27Elizabeth Goldmuntz28Josephine Elia29John Maris30Robert Grundmeier31Marcella Devoto32Brendan Keating33Michael March34Renata Pellagrino35Struan F. A. Grant36Patrick M. A. Sleiman37Mingyao Li38Evan E. Eichler39Hakon Hakonarson40The Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaDepartment of Genome Sciences, University of Washington School of MedicineThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaDepartment of Computer Science, New Jersey Institute of TechnologyThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaHelen Diller Comprehensive Family Cancer Center and Department of Radiation Oncology, University of California San FranciscoDepartment of Pediatrics, University of Pennsylvania Perelman School of MedicineDepartment of Pediatrics, University of Pennsylvania Perelman School of MedicineDepartment of Pediatrics, University of Pennsylvania Perelman School of MedicineCenter for Biomedical Informatics, The Children’s Hospital of PhiladelphiaDepartment of Pediatrics, University of Pennsylvania Perelman School of MedicineThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaDepartment of Biostatistics and Epidemiology, University of Pennsylvania School of MedicineDepartment of Genome Sciences, University of Washington School of MedicineThe Center for Applied Genomics, The Children’s Hospital of PhiladelphiaAssociations of copy number variations (CNVs) with complex traits are challenging to study because of their low frequency. Here, the authors analyse SNP array and array comparative genomic hybridization data of 100,028 individuals and report their associations with immune-related, cardiometabolic and neuropsychiatric diseases as well as cancer.https://doi.org/10.1038/s41467-019-13624-1