Persistent topology and metastable state in conformational dynamics.

The large amount of molecular dynamics simulation data produced by modern computational models brings big opportunities and challenges to researchers. Clustering algorithms play an important role in understanding biomolecular kinetics from the simulation data, especially under the Markov state model...

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Bibliographic Details
Main Authors: Huang-Wei Chang, Sergio Bacallado, Vijay S Pande, Gunnar E Carlsson
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2013-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3614941?pdf=render