Comparison of three assembly strategies for a heterozygous seedless grapevine genome assembly

Comparison of three assembly strategies for a heterozygous seedless grapevine genome assembly

Abstract Background De novo heterozygous assembly is an ongoing challenge requiring improved assembly approaches. In this study, three strategies were used to develop de novo Vitis vinifera ‘Sultanina’ genome assemblies for comparison with the inbred V. vinifera (PN40024 12X.v2) reference genome and...

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Bibliographic Details
Main Authors: Sagar Patel, Zhixiu Lu, Xiaozhu Jin, Padmapriya Swaminathan, Erliang Zeng, Anne Y. Fennell
Format: Article
Language:English
Published: BMC 2018-01-01
Series:BMC Genomics
Subjects:
De novo genome assembly
Heterozygous
Vitis vinifera
Seedless grape
Sultanina
PLATANUS
Online Access:http://link.springer.com/article/10.1186/s12864-018-4434-2

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http://link.springer.com/article/10.1186/s12864-018-4434-2

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