Characterization and visualization of RNA secondary structure Boltzmann ensemble via information theory

Characterization and visualization of RNA secondary structure Boltzmann ensemble via information theory

Abstract Background The nearest neighbor model and associated dynamic programming algorithms allow for the efficient estimation of the RNA secondary structure Boltzmann ensemble. However because a given RNA secondary structure only contains a fraction of the possible helices that could form from a g...

Full description

Bibliographic Details
Main Authors: Luan Lin, Wilson H. McKerrow, Bryce Richards, Chukiat Phonsom, Charles E. Lawrence
Format: Article
Language:English
Published: BMC 2018-03-01
Series:BMC Bioinformatics
Subjects:
RNA
RNA secondary structure
Nearest neighbor model
Information theory
Mutual information
Online Access:http://link.springer.com/article/10.1186/s12859-018-2078-5

Internet

http://link.springer.com/article/10.1186/s12859-018-2078-5

Similar Items