Streamlining differential exon and 3′ UTR usage with diffUTR

Streamlining differential exon and 3′ UTR usage with diffUTR

Abstract Background Despite the importance of alternative poly-adenylation and 3′ UTR length for a variety of biological phenomena, there are limited means of detecting UTR changes from standard transcriptomic data. Results We present the diffUTR Bioconductor package which streamlines and improves u...

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Bibliographic Details
Main Authors: Stefan Gerber, Gerhard Schratt, Pierre-Luc Germain
Format: Article
Language:English
Published: BMC 2021-04-01
Series:BMC Bioinformatics
Subjects:
Gene expression
Transcriptomic
RNAseq
Alternative poly-adenylation
Alternative splicing
Differential exon usage
Online Access:https://doi.org/10.1186/s12859-021-04114-7

Internet

https://doi.org/10.1186/s12859-021-04114-7

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