MLSTar: automatic multilocus sequence typing of bacterial genomes in R

Multilocus sequence typing (MLST) is a standard tool in population genetics and bacterial epidemiology that assesses the genetic variation present in a reduced number of housekeeping genes (typically seven) along the genome. This methodology assigns arbitrary integer identifiers to genetic variation...

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Bibliographic Details
Main Authors: Ignacio Ferrés, Gregorio Iraola
Format: Article
Language:English
Published: PeerJ Inc. 2018-06-01
Series:PeerJ
Subjects:
Online Access:https://peerj.com/articles/5098.pdf