Hypertension and genetic variation in endothelial-specific genes.

Genome-wide association (GWA) studies usually detect common genetic variants with low-to-medium effect sizes. Many contributing variants are not revealed, since they fail to reach significance after strong correction for multiple comparisons. The WTCCC study for hypertension, for example, failed to...

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Main Authors: Erik Larsson, Björn Wahlstrand, Bo Hedblad, Thomas Hedner, Sverre E Kjeldsen, Olle Melander, Per Lindahl
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2013-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC3639261?pdf=render
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spelling doaj-ceaec8c178584ba08f48f3f8de8a8f7e2020-11-25T01:01:10ZengPublic Library of Science (PLoS)PLoS ONE1932-62032013-01-0184e6203510.1371/journal.pone.0062035Hypertension and genetic variation in endothelial-specific genes.Erik LarssonBjörn WahlstrandBo HedbladThomas HednerSverre E KjeldsenOlle MelanderPer LindahlGenome-wide association (GWA) studies usually detect common genetic variants with low-to-medium effect sizes. Many contributing variants are not revealed, since they fail to reach significance after strong correction for multiple comparisons. The WTCCC study for hypertension, for example, failed to identify genome-wide significant associations. We hypothesized that genetic variation in genes expressed specifically in the endothelium may be important for hypertension development. Results from the WTCCC study were combined with previously published gene expression data from mice to specifically investigate SNPs located within endothelial-specific genes, bypassing the requirement for genome-wide significance. Six SNPs from the WTCCC study were selected for independent replication in 5205 hypertensive patients and 5320 population-based controls, and successively in a cohort of 16,537 individuals. A common variant (rs10860812) in the DRAM (damage-regulated autophagy modulator) locus showed association with hypertension (P = 0.008) in the replication study. The minor allele (A) had a protective effect (OR = 0.93; 95% CI 0.88-0.98 per A-allele), which replicates the association in the WTCCC GWA study. However, a second follow-up, in the larger cohort, failed to reveal an association with blood pressure. We further tested the endothelial-specific genes for co-localization with a panel of newly discovered SNPs from large meta-GWAS on hypertension or blood pressure. There was no significant overlap between those genes and hypertension or blood pressure loci. The result does not support the hypothesis that genetic variation in genes expressed in endothelium plays an important role for hypertension development. Moreover, the discordant association of rs10860812 with blood pressure in the case control study versus the larger Malmö Preventive Project-study highlights the importance of rigorous replication in multiple large independent studies.http://europepmc.org/articles/PMC3639261?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Erik Larsson
Björn Wahlstrand
Bo Hedblad
Thomas Hedner
Sverre E Kjeldsen
Olle Melander
Per Lindahl
spellingShingle Erik Larsson
Björn Wahlstrand
Bo Hedblad
Thomas Hedner
Sverre E Kjeldsen
Olle Melander
Per Lindahl
Hypertension and genetic variation in endothelial-specific genes.
PLoS ONE
author_facet Erik Larsson
Björn Wahlstrand
Bo Hedblad
Thomas Hedner
Sverre E Kjeldsen
Olle Melander
Per Lindahl
author_sort Erik Larsson
title Hypertension and genetic variation in endothelial-specific genes.
title_short Hypertension and genetic variation in endothelial-specific genes.
title_full Hypertension and genetic variation in endothelial-specific genes.
title_fullStr Hypertension and genetic variation in endothelial-specific genes.
title_full_unstemmed Hypertension and genetic variation in endothelial-specific genes.
title_sort hypertension and genetic variation in endothelial-specific genes.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2013-01-01
description Genome-wide association (GWA) studies usually detect common genetic variants with low-to-medium effect sizes. Many contributing variants are not revealed, since they fail to reach significance after strong correction for multiple comparisons. The WTCCC study for hypertension, for example, failed to identify genome-wide significant associations. We hypothesized that genetic variation in genes expressed specifically in the endothelium may be important for hypertension development. Results from the WTCCC study were combined with previously published gene expression data from mice to specifically investigate SNPs located within endothelial-specific genes, bypassing the requirement for genome-wide significance. Six SNPs from the WTCCC study were selected for independent replication in 5205 hypertensive patients and 5320 population-based controls, and successively in a cohort of 16,537 individuals. A common variant (rs10860812) in the DRAM (damage-regulated autophagy modulator) locus showed association with hypertension (P = 0.008) in the replication study. The minor allele (A) had a protective effect (OR = 0.93; 95% CI 0.88-0.98 per A-allele), which replicates the association in the WTCCC GWA study. However, a second follow-up, in the larger cohort, failed to reveal an association with blood pressure. We further tested the endothelial-specific genes for co-localization with a panel of newly discovered SNPs from large meta-GWAS on hypertension or blood pressure. There was no significant overlap between those genes and hypertension or blood pressure loci. The result does not support the hypothesis that genetic variation in genes expressed in endothelium plays an important role for hypertension development. Moreover, the discordant association of rs10860812 with blood pressure in the case control study versus the larger Malmö Preventive Project-study highlights the importance of rigorous replication in multiple large independent studies.
url http://europepmc.org/articles/PMC3639261?pdf=render
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