LDheatmap: An R Function for Graphical Display of Pairwise Linkage Disequilibria Between Single Nucleotide Polymorphisms

We describe the R function LDheatmap() which produces a graphical display, as a heat map, of pairwise linkage disequilibrium measurements between single nucleotide polymorphisms within a genomic region. LDheatmap() uses the grid graphics system, an alternative to the traditional R graphics system. T...

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Bibliographic Details
Main Authors: Ji-Hyung Shin, Sigal Blay, Brad McNeney, Jinko Graham
Format: Article
Language:English
Published: Foundation for Open Access Statistics 2006-09-01
Series:Journal of Statistical Software
Online Access:http://www.jstatsoft.org/index.php/jss/article/view/1501