16SPIP: a comprehensive analysis pipeline for rapid pathogen detection in clinical samples based on 16S metagenomic sequencing

16SPIP: a comprehensive analysis pipeline for rapid pathogen detection in clinical samples based on 16S metagenomic sequencing

Abstract Background Pathogen detection in clinical samples based on 16S metagenomic sequencing technology in microbiology laboratories is an important strategy for clinical diagnosis, public health surveillance, and investigations of outbreaks. However, the implementation of the technology is limite...

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Bibliographic Details
Main Authors: Jiaojiao Miao, Na Han, Yujun Qiang, Tingting Zhang, Xiuwen Li, Wen Zhang
Format: Article
Language:English
Published: BMC 2017-12-01
Series:BMC Bioinformatics
Subjects:
16S
High-throughput sequencing
Pathogens
16SPIP
Comprehensive analysis pipeline
Online Access:http://link.springer.com/article/10.1186/s12859-017-1975-3

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http://link.springer.com/article/10.1186/s12859-017-1975-3

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