PGA HPC Implementation of Microtubule Brownian Dynamics Simulations

PGA HPC Implementation of Microtubule Brownian Dynamics Simulations

This paper presents high performance simulation of microtubule molecular dynamics implemented on Xilinx Virtex-7 FPGA using high level synthesis tool Vivado HLS. FPGA implementation is compared to multicore Intel Xeon CPU and Nvidia K40 GPU implementations in terms of performance and energy efficien...

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Bibliographic Details
Main Authors: Y. A. Rumyanstev, P. N. Zakharov, N. A. Abrashitova, A. V. Shmatok, V. O. Ryzhikh, N. B. Gudimchuk, F. I. Ataullakhanov
Format: Article
Language:English
Published: Ivannikov Institute for System Programming of the Russian Academy of Sciences 2018-10-01
Series:Труды Института системного программирования РАН
Subjects:
высокопроизводительные вычисления
плис
микротрубочки
высокоуровневый синтез
броуновская динамика
Online Access:https://ispranproceedings.elpub.ru/jour/article/view/120

Internet

https://ispranproceedings.elpub.ru/jour/article/view/120

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