PALMER: improving pathway annotation based on the biomedical literature mining with a constrained latent block model

Abstract Background In systems biology, it is of great interest to identify previously unreported associations between genes. Recently, biomedical literature has been considered as a valuable resource for this purpose. While classical clustering algorithms have popularly been used to investigate ass...

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Bibliographic Details
Main Authors: Jin Hyun Nam, Daniel Couch, Willian A. da Silveira, Zhenning Yu, Dongjun Chung
Format: Article
Language:English
Published: BMC 2020-10-01
Series:BMC Bioinformatics
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12859-020-03756-3