Biochemical complexity drives log-normal variation in genetic expression

Cells exhibit a high degree of variation in levels of gene expression, even within otherwise homogeneous populations. The standard model to describe this variation centres on a gamma distribution driven by stochastic bursts of translation. Stochastic bursting, however, cannot account for the well-es...

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Main Author: Jacob Beal
Format: Article
Language:English
Published: Wiley 2017-07-01
Series:Engineering Biology
Subjects:
Online Access:https://digital-library.theiet.org/content/journals/10.1049/enb.2017.0004
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spelling doaj-dd24c93c5742476bbaa21256f5c5f59d2021-04-02T14:04:33ZengWileyEngineering Biology2398-61822017-07-0110.1049/enb.2017.0004ENB.2017.0004Biochemical complexity drives log-normal variation in genetic expressionJacob Beal0Raytheon BBN TechnologiesCells exhibit a high degree of variation in levels of gene expression, even within otherwise homogeneous populations. The standard model to describe this variation centres on a gamma distribution driven by stochastic bursts of translation. Stochastic bursting, however, cannot account for the well-established behaviour of strong transcriptional repressors. Instead, it can be shown that the very complexity of the biochemical processes involved in gene expression drives an emergent log-normal distribution of expression levels. Emergent log-normal distributions can account for the observed behaviour of transcriptional repressors, are still compatible with stochastically constrained distributions, and have important implications for both analysis of gene expression data and the engineering of biological organisms.https://digital-library.theiet.org/content/journals/10.1049/enb.2017.0004geneticscellular biophysicsgamma distributionstochastic processesbiochemical complexitylog-normal variationgenetic expressiongene expressiongamma distributionstochastic burstingtranscriptional repressorsstochastically constrained distributions
collection DOAJ
language English
format Article
sources DOAJ
author Jacob Beal
spellingShingle Jacob Beal
Biochemical complexity drives log-normal variation in genetic expression
Engineering Biology
genetics
cellular biophysics
gamma distribution
stochastic processes
biochemical complexity
log-normal variation
genetic expression
gene expression
gamma distribution
stochastic bursting
transcriptional repressors
stochastically constrained distributions
author_facet Jacob Beal
author_sort Jacob Beal
title Biochemical complexity drives log-normal variation in genetic expression
title_short Biochemical complexity drives log-normal variation in genetic expression
title_full Biochemical complexity drives log-normal variation in genetic expression
title_fullStr Biochemical complexity drives log-normal variation in genetic expression
title_full_unstemmed Biochemical complexity drives log-normal variation in genetic expression
title_sort biochemical complexity drives log-normal variation in genetic expression
publisher Wiley
series Engineering Biology
issn 2398-6182
publishDate 2017-07-01
description Cells exhibit a high degree of variation in levels of gene expression, even within otherwise homogeneous populations. The standard model to describe this variation centres on a gamma distribution driven by stochastic bursts of translation. Stochastic bursting, however, cannot account for the well-established behaviour of strong transcriptional repressors. Instead, it can be shown that the very complexity of the biochemical processes involved in gene expression drives an emergent log-normal distribution of expression levels. Emergent log-normal distributions can account for the observed behaviour of transcriptional repressors, are still compatible with stochastically constrained distributions, and have important implications for both analysis of gene expression data and the engineering of biological organisms.
topic genetics
cellular biophysics
gamma distribution
stochastic processes
biochemical complexity
log-normal variation
genetic expression
gene expression
gamma distribution
stochastic bursting
transcriptional repressors
stochastically constrained distributions
url https://digital-library.theiet.org/content/journals/10.1049/enb.2017.0004
work_keys_str_mv AT jacobbeal biochemicalcomplexitydriveslognormalvariationingeneticexpression
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