Automated Curation of CNMF-E-Extracted ROI Spatial Footprints and Calcium Traces Using Open-Source AutoML Tools

Automated Curation of CNMF-E-Extracted ROI Spatial Footprints and Calcium Traces Using Open-Source AutoML Tools

In vivo 1-photon (1p) calcium imaging is an increasingly prevalent method in behavioral neuroscience. Numerous analysis pipelines have been developed to improve the reliability and scalability of pre-processing and ROI extraction for these large calcium imaging datasets. Despite these advancements i...

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Bibliographic Details
Main Authors: Lina M. Tran, Andrew J. Mocle, Adam I. Ramsaran, Alexander D. Jacob, Paul W. Frankland, Sheena A. Josselyn
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-07-01
Series:Frontiers in Neural Circuits
Subjects:
calcium imaging
open-source
machine learning
microendoscopy
1-photon
CNMF-E
Online Access:https://www.frontiersin.org/article/10.3389/fncir.2020.00042/full

Internet

https://www.frontiersin.org/article/10.3389/fncir.2020.00042/full

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