Kohdista: an efficient method to index and query possible Rmap alignments

Abstract Background Genome-wide optical maps are ordered high-resolution restriction maps that give the position of occurrence of restriction cut sites corresponding to one or more restriction enzymes. These genome-wide optical maps are assembled using an overlap-layout-consensus approach using raw...

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Bibliographic Details
Main Authors: Martin D. Muggli, Simon J. Puglisi, Christina Boucher
Format: Article
Language:English
Published: BMC 2019-12-01
Series:Algorithms for Molecular Biology
Subjects:
Online Access:https://doi.org/10.1186/s13015-019-0160-9